STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_100820Deoxyadenosine/deoxycytidine kinase. (204 aa)    
Predicted Functional Partners:
SAMN05216323_104523
NADH-quinone oxidoreductase subunit F.
   
 0.996
SAMN05216323_101537
Long-chain acyl-CoA synthetase.
  
 0.947
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.946
SAMN05216323_100420
NAD(P)H-binding.
   
 0.932
SAMN05216323_100734
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
   
 0.932
SAMN05216323_106617
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase.
      0.902
SAMN05216323_100178
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.881
SAMN05216323_103112
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
   
 0.881
SAMN05216323_103814
Ni,Fe-hydrogenase III small subunit.
   
 0.881
SAMN05216323_104514
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein.
   
 0.809
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.