STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_100857Putative esterase. (392 aa)    
Predicted Functional Partners:
SAMN05216323_100858
Putative signal transducing protein.
       0.773
SAMN05216323_10593
Thioredox_DsbH domain-containing protein.
    
   0.728
SAMN05216323_11431
Alpha-glucosidase/oligosaccharide 4-alpha-D-glucosyltransferase; Belongs to the glycosyl hydrolase 31 family.
  
  
  0.680
SAMN05216323_101327
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
  
  0.663
SAMN05216323_100859
Hemolysin III.
       0.648
SAMN05216323_105128
Outer membrane protein beta-barrel domain-containing protein.
     
 0.603
SAMN05216323_10696
Glycosidase.
 
  
  0.585
SAMN05216323_100856
Cytosine-specific methyltransferase.
       0.532
SAMN05216323_100185
Planctomycete cytochrome C.
  
  
  0.478
SAMN05216323_101146
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.468
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.