STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_100916Uncharacterized protein. (227 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
    0.821
SAMN05216323_100915
DNA helicase.
       0.772
SAMN05216323_10705
DUF5606 domain-containing protein.
  
     0.771
SAMN05216323_100527
Uroporphyrinogen-III synthase.
  
     0.768
SAMN05216323_100581
Uncharacterized metal-binding protein YceD, DUF177 family.
  
     0.768
SAMN05216323_102333
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.758
SAMN05216323_106010
TolA-binding protein.
  
     0.752
SAMN05216323_10147
Rod shape-determining protein MreD.
  
     0.742
SAMN05216323_102917
Cell division protein FtsQ.
  
     0.736
SAMN05216323_103916
Gliding motility-associated lipoprotein GldH.
  
     0.733
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.