STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_101327Glycosidase; Belongs to the glycosyl hydrolase 13 family. (617 aa)    
Predicted Functional Partners:
SAMN05216323_100611
L-asparagine transporter.
   
 0.959
SAMN05216323_101329
Glycosidase.
 
0.904
SAMN05216323_101325
Maltose phosphorylase.
 
 
 0.857
SAMN05216323_101939
Glycosyl-hydrolase 97 C-terminal, oligomerisation.
 
  
 0.852
SAMN05216323_101323
Maltose/moltooligosaccharide transporter.
 
  
 0.838
SAMN05216323_10522
Phosphorylase / glycogen(Starch) synthase.
 
 0.830
SAMN05216323_101324
Beta-phosphoglucomutase.
 
 
 0.804
SAMN05216323_103927
Starch synthase.
 
 
 0.776
SAMN05216323_101320
Starch-binding associating with outer membrane.
 
    0.769
SAMN05216323_101317
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
 
 
0.734
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
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