STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_101550L-erythro-3,5-diaminohexanoate dehydrogenase. (345 aa)    
Predicted Functional Partners:
SAMN05216323_101554
Beta-lysine 5,6-aminomutase alpha subunit /D-lysine 5,6-aminomutase alpha subunit.
 
 
  0.969
SAMN05216323_101555
Beta-lysine 5,6-aminomutase beta subunit /D-lysine 5,6-aminomutase beta subunit.
 
 
 0.968
SAMN05216323_101548
3-keto-5-aminohexanoate cleavage enzyme.
 
  
  0.947
SAMN05216323_101552
Uncharacterized protein.
 
     0.924
SAMN05216323_101547
3-aminobutyryl-CoA ammonia-lyase.
 
 
  0.911
SAMN05216323_101553
MutS domain V.
 
     0.822
SAMN05216323_100178
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.821
SAMN05216323_101262
Glycine/D-amino acid oxidase.
  
 
 0.801
SAMN05216323_102335
Glycine C-acetyltransferase.
  
 
 0.793
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
  
 
 0.793
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.