STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_101559Transcriptional regulator, y4mF family. (67 aa)    
Predicted Functional Partners:
SAMN05216323_101557
Serine/threonine-protein kinase HipA.
 
     0.949
SAMN05216323_101558
Serine/threonine-protein kinase HipA.
 
     0.949
SAMN05216323_103227
Phage-related protein.
 
 
 0.835
SAMN05216323_103816
Serine/threonine-protein kinase HipA.
 
     0.785
SAMN05216323_103817
Serine/threonine-protein kinase HipA.
 
     0.783
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.745
SAMN05216323_108910
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
     
 0.688
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.653
SAMN05216323_101561
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.604
SAMN05216323_105915
O-acetylhomoserine sulfhydrylase.
    
 0.531
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.