STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_102912Hemolysin, contains CBS domains. (420 aa)    
Predicted Functional Partners:
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
 0.803
SAMN05216323_102910
TPR_REGION domain-containing protein.
 
     0.571
SAMN05216323_10632
Membrane protein TerC, possibly involved in tellurium resistance.
      0.554
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase.
    
  0.532
surE
5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.528
SAMN05216323_102913
Peptidylprolyl isomerase.
       0.520
SAMN05216323_102911
LPS export ABC transporter protein LptC.
  
    0.503
SAMN05216323_101437
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 
  0.442
coaX
Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.431
SAMN05216323_10299
Uncharacterized protein.
       0.431
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
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