STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05216323_10786Barrel-sandwich domain of CusB or HlyD membrane-fusion. (473 aa)    
Predicted Functional Partners:
SAMN05216323_10787
Putative ABC transport system permease protein.
 
  0.969
SAMN05216323_11056
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.949
SAMN05216323_10788
Outer membrane protein TolC.
 
  0.941
SAMN05216323_10567
Putative ABC transport system permease protein.
 
 0.836
SAMN05216323_10143
Putative ABC transport system permease protein.
 
  0.833
SAMN05216323_1001100
Putative ABC transport system permease protein.
 
  0.829
SAMN05216323_102248
Putative ABC transport system permease protein.
  
 0.815
SAMN05216323_105619
Putative ABC transport system permease protein.
  
 0.815
SAMN05216323_10566
FtsX-like permease family protein.
  
 0.815
SAMN05216323_103427
Putative ABC transport system ATP-binding protein.
  
  0.751
Your Current Organism:
Williamwhitmania taraxaci
NCBI taxonomy Id: 1640674
Other names: Bacteroidales bacterium A7P-90m, DSM 100563, JCM 30888, W. taraxaci, Williamwhitmania taraxaci Pikuta et al. 2017, bacterium A7P-90m, strain A7P-90m
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.