STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQM36792.1DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)    
Predicted Functional Partners:
OQM36791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.951
OQM35643.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.795
OQM36246.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.792
OQM36768.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.790
OQM36192.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
OQM36070.1
DNA polymerase beta domain protein region (fragment); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.481
Your Current Organism:
Halomicronema hongdechloris
NCBI taxonomy Id: 1641165
Other names: H. hongdechloris C2206, Halomicronema hongdechloris C2206, Halomicronema sp. C2206
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.