STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD89_00373-oxoadipate CoA-transferase. (254 aa)    
Predicted Functional Partners:
XD89_0038
3-oxoadipate:succinyl-CoA transferase, B subunit.
 0.999
XD89_0040
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.928
XD89_0335
Pyruvate-flavodoxin oxidoreductase.
    
 0.895
XD89_0965
Pyruvate-flavodoxin oxidoreductase.
    
 0.895
XD89_0036
Oxidoreductase.
       0.791
XD89_0039
Hypothetical protein.
       0.773
XD89_0076
Thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.771
XD89_0287
Putative beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.771
XD89_0256
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
    
 0.713
XD89_0437
Hypothetical protein.
  
 
 0.643
Your Current Organism:
Anaerolineae bacterium 4920
NCBI taxonomy Id: 1641376
Other names: A. bacterium 49_20, Anaerolineae bacterium 49_20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.