Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XD89_0088 | XD89_0314 | XD89_0088 | XD89_0314 | DNA polymerase. | Exodeoxyribonuclease III. | 0.921 |
| XD89_0088 | XD89_0393 | XD89_0088 | XD89_0393 | DNA polymerase. | HhH-GPD family protein. | 0.530 |
| XD89_0088 | topA | XD89_0088 | XD89_0345 | DNA polymerase. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.861 |
| XD89_0246 | XD89_0314 | XD89_0246 | XD89_0314 | Putative M20 family peptidase. | Exodeoxyribonuclease III. | 0.595 |
| XD89_0314 | XD89_0088 | XD89_0314 | XD89_0088 | Exodeoxyribonuclease III. | DNA polymerase. | 0.921 |
| XD89_0314 | XD89_0246 | XD89_0314 | XD89_0246 | Exodeoxyribonuclease III. | Putative M20 family peptidase. | 0.595 |
| XD89_0314 | XD89_0318 | XD89_0314 | XD89_0318 | Exodeoxyribonuclease III. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.764 |
| XD89_0314 | XD89_0385 | XD89_0314 | XD89_0385 | Exodeoxyribonuclease III. | Biotin--[acetyl-CoA-carboxylase] ligase. | 0.875 |
| XD89_0314 | XD89_0393 | XD89_0314 | XD89_0393 | Exodeoxyribonuclease III. | HhH-GPD family protein. | 0.966 |
| XD89_0314 | XD89_0525 | XD89_0314 | XD89_0525 | Exodeoxyribonuclease III. | Cold-shock DNA-binding domain protein. | 0.794 |
| XD89_0314 | XD89_0856 | XD89_0314 | XD89_0856 | Exodeoxyribonuclease III. | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.764 |
| XD89_0314 | XD89_0873 | XD89_0314 | XD89_0873 | Exodeoxyribonuclease III. | A/G-specific adenine glycosylase. | 0.959 |
| XD89_0314 | fusA | XD89_0314 | XD89_0183 | Exodeoxyribonuclease III. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.779 |
| XD89_0314 | topA | XD89_0314 | XD89_0345 | Exodeoxyribonuclease III. | DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...] | 0.618 |
| XD89_0318 | XD89_0314 | XD89_0318 | XD89_0314 | Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease III. | 0.764 |
| XD89_0385 | XD89_0314 | XD89_0385 | XD89_0314 | Biotin--[acetyl-CoA-carboxylase] ligase. | Exodeoxyribonuclease III. | 0.875 |
| XD89_0385 | XD89_0873 | XD89_0385 | XD89_0873 | Biotin--[acetyl-CoA-carboxylase] ligase. | A/G-specific adenine glycosylase. | 0.509 |
| XD89_0393 | XD89_0088 | XD89_0393 | XD89_0088 | HhH-GPD family protein. | DNA polymerase. | 0.530 |
| XD89_0393 | XD89_0314 | XD89_0393 | XD89_0314 | HhH-GPD family protein. | Exodeoxyribonuclease III. | 0.966 |
| XD89_0393 | XD89_0873 | XD89_0393 | XD89_0873 | HhH-GPD family protein. | A/G-specific adenine glycosylase. | 0.745 |
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