STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD89_0505Rubredoxin. (53 aa)    
Predicted Functional Partners:
XD89_0542
Putative oxidoreductase.
  
 0.995
XD89_0335
Pyruvate-flavodoxin oxidoreductase.
    
 0.887
XD89_0965
Pyruvate-flavodoxin oxidoreductase.
    
 0.887
XD89_0256
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
    
 0.825
XD89_0040
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.663
XD89_0715
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.632
XD89_0076
Thiolase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.624
XD89_0287
Putative beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.624
XD89_0241
Strongly similar to glutamate-ammonia ligase GlnA.
     
 0.612
sucD
Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
    
  0.600
Your Current Organism:
Anaerolineae bacterium 4920
NCBI taxonomy Id: 1641376
Other names: A. bacterium 49_20, Anaerolineae bacterium 49_20
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