STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD89_0755Hypothetical protein; Belongs to the 'phage' integrase family. (314 aa)    
Predicted Functional Partners:
XD89_0335
Pyruvate-flavodoxin oxidoreductase.
    
  0.781
XD89_0965
Pyruvate-flavodoxin oxidoreductase.
    
  0.781
XD89_0754
LytR family transcriptional protein.
       0.714
XD89_0092
Putative site-specific recombinase.
  
     0.662
XD89_0207
Putative phosphoribosyltransferase.
  
    0.645
XD89_0256
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
    
  0.624
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
  
  
 0.575
XD89_0498
Uncharacterized protein; Belongs to the SOS response-associated peptidase family.
   
  
 0.554
XD89_0434
Hypothetical protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
   
 0.521
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
  
    0.517
Your Current Organism:
Anaerolineae bacterium 4920
NCBI taxonomy Id: 1641376
Other names: A. bacterium 49_20, Anaerolineae bacterium 49_20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.