rplU protein (Anaerolineae bacterium 4920) - STRING interaction network

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Score

rplU

50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (105 aa)

Predicted Functional Partners:

rplP

0.999

rpmA

0.999

rpsI

0.998

rplM

0.998

rplI

0.998

rpmB

0.997

rplO

0.997

rpmD

0.997

rpsE

0.997

rplR

0.997

Your Current Organism:

Anaerolineae bacterium 4920

NCBI taxonomy Id: 1641376
Other names: A. bacterium 49_20, Anaerolineae bacterium 49_20

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplI	rplM	XD89_0593	XD89_0561	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplI	rplO	XD89_0593	XD89_0159	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.997
rplI	rplP	XD89_0593	XD89_0171	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplI	rplR	XD89_0593	XD89_0162	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.998
rplI	rplU	XD89_0593	XD89_0770	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplI	rpmA	XD89_0593	XD89_0771	50S ribosomal protein L9; Binds to the 23S rRNA.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL27 family.	0.997
rplI	rpmB	XD89_0593	XD89_0054	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplI	rpmD	XD89_0593	XD89_0160	50S ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L30.	0.997
rplI	rpsE	XD89_0593	XD89_0161	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.997
rplI	rpsI	XD89_0593	XD89_0560	50S ribosomal protein L9; Binds to the 23S rRNA.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.997
rplM	rplI	XD89_0561	XD89_0593	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.997
rplM	rplO	XD89_0561	XD89_0159	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplM	rplP	XD89_0561	XD89_0171	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplM	rplR	XD89_0561	XD89_0162	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplM	rplU	XD89_0561	XD89_0770	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplM	rpmA	XD89_0561	XD89_0771	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmB	XD89_0561	XD89_0054	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmD	XD89_0561	XD89_0160	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L30.	0.999
rplM	rpsE	XD89_0561	XD89_0161	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplM	rpsI	XD89_0561	XD89_0560	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999