STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD89_0853Putative glycosyltransferase. (325 aa)    
Predicted Functional Partners:
XD89_0854
Threonine synthase.
       0.808
XD89_0852
Pyridoxal-phosphate dependent protein.
       0.767
XD89_0127
Polysaccharide deacetylase.
  
 
 0.622
XD89_0025
Putative glycosyltransferase.
  
  
 0.582
XD89_0320
NAD-dependent epimerase/dehydratase family protein.
 
 
  0.579
XD89_0138
Phosphoglycerate mutase family protein.
   
 
  0.548
XD89_0186
Putative L-threonine dehydrogenase.
  
 
  0.512
XD89_0631
NAD-dependent epimerase/dehydratase.
  
 
  0.512
XD89_0688
NAD-dependent epimerase/dehydratase family protein.
  
 
  0.512
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
  0.512
Your Current Organism:
Anaerolineae bacterium 4920
NCBI taxonomy Id: 1641376
Other names: A. bacterium 49_20, Anaerolineae bacterium 49_20
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