STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLR62726.1PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family. (75 aa)    
Predicted Functional Partners:
KLR62727.1
Delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase.
 
     0.548
KLR62653.1
Putative RNA-binding protein containing a PIN domain; PFAM: YacP-like NYN domain.
  
     0.544
KLR62072.1
PFAM: Helix-turn-helix domain.
  
     0.508
acpS
Phosphopantetheine--protein transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.486
KLR60879.1
PFAM: Glyoxalase-like domain.
  
     0.445
KLR62722.1
Dethiobiotin synthetase; PFAM: AAA domain.
       0.433
KLR62723.1
7-keto-8-aminopelargonate synthetase-like enzyme; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase.
       0.415
Your Current Organism:
Actinobacteria bacterium IMCC26207
NCBI taxonomy Id: 1641811
Other names: A. bacterium IMCC26207
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