STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM55091.1Putative metallophosphatase domain {ECO:0000313|EMBL:CEA14582,1}; tr|A0A098BX86|A0A098BX86_9PORP;evalue=1e-112; PctID=48.10; score=413. (416 aa)    
Predicted Functional Partners:
rnhB
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
    0.786
dnaA
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 0.562
SCM57382.1
Putative protein {ECO:0000313|EMBL:CEA15821,1}; tr|A0A098C084|A0A098C084_9PORP;evalue=3e-101; PctID=55.00; score=375.
  
 
   0.511
SCM57619.1
Putative protein {ECO:0000313|EMBL:CEA15647,1}; tr|A0A098C151|A0A098C151_9PORP;evalue=2e-148; PctID=53.70; score=532.
  
 
   0.469
SCM58835.1
Putative protein {ECO:0000313|EMBL:CEA16160,1}; tr|A0A098BZV2|A0A098BZV2_9PORP;evalue=2e-077; PctID=76.27; score=294.
  
     0.454
SCM59764.1
Putative protein {ECO:0000313|EMBL:CEA17059,1}; tr|A0A098C2C9|A0A098C2C9_9PORP;evalue=1e-116; PctID=55.77; score=426.
  
     0.453
SCM58837.1
Putative membrane protein {ECO:0000313|EMBL:CEA16162,1}; tr|A0A098C2P4|A0A098C2P4_9PORP;evalue=2e-057; PctID=58.76; score=228.
  
     0.424
SCM56868.1
Putative membrane protein {ECO:0000313|EMBL:CEA16094,1}; tr|A0A098BZK7|A0A098BZK7_9PORP;evalue=0.0; PctID=52.38; score=877.
  
    0.419
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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