STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM55172.1Putative protein {ECO:0000313|EMBL:EFS30817,1}; tr|E5C6Q2|E5C6Q2_9BACE;evalue=0.0; PctID=64.94; score=682. (502 aa)    
Predicted Functional Partners:
susC3
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-039; PctID=37.01; score=166.
 
     0.942
SCM55171.1
Putative protein {ECO:0000313|EMBL:EFS30816,2}; tr|E5C6Q1|E5C6Q1_9BACE;evalue=6e-171; PctID=63.62; score=607.
 
 
   0.910
susC17
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=6e-031; PctID=36.86; score=137.
 
 
   0.819
SCM55705.1
Putative protein {ECO:0000313|EMBL:KKN84064,1}; tr|A0A0F9TXM3|A0A0F9TXM3_9ZZZZ;evalue=0.0; PctID=50.64; score=1096.
  
 
   0.818
SCM55707.1
Putative protein {ECO:0000313|EMBL:KKN84063,1}; tr|A0A0F9WYE9|A0A0F9WYE9_9ZZZZ;evalue=5e-158; PctID=50.72; score=564.
  
 
   0.802
SCM55175.1
Glycosyl hydrolase 38 domain protein {ECO:0000313|EMBL:ADZ80829,1}; tr|F4C7I6|F4C7I6_SPHS2;evalue=0.0; PctID=44.10; score=681.
 
     0.786
susC71
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-023; PctID=31.39; score=113.
 
 
   0.778
susC55
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=2e-029; PctID=27.53; score=132.
 
 
   0.777
susC15
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=9e-053; PctID=30.80; score=209.
 
     0.776
susC35
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=5e-049; PctID=43.02; score=197.
 
     0.760
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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