STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM55224.1Putative protein {ECO:0000313|EMBL:CEA14752,1}; tr|A0A098BW16|A0A098BW16_9PORP;evalue=3e-058; PctID=100.00; score=229. (126 aa)    
Predicted Functional Partners:
SCM55225.1
Mobilization protein {ECO:0000313|EMBL:CEA14754,1}; tr|A0A098BW14|A0A098BW14_9PORP;evalue=1e-168; PctID=97.70; score=598.
 
     0.951
SCM55223.1
Putative protein {ECO:0000313|EMBL:CEA14746,1}; tr|A0A098BXF8|A0A098BXF8_9PORP;evalue=7e-173; PctID=93.91; score=612.
 
     0.763
SCM58546.1
Outer membrane efflux family protein {ECO:0000313|EMBL:EXZ05643,1}; tr|A0A015VEJ7|A0A015VEJ7_BACFG, tr|A0A017NCL7|A0A017NCL7_BACFG, tr|A0A0E2AE19|A0A0E2AE19_BACFG, tr|A0A0E2T9Y6|A0A0E2T9Y6_BACFG,tr|D1JML5|D1JML5_9BACE, tr|Q5LDG1|Q5LDG1_BACFN;evalue=4e-094; PctID=46.44; score=351.
  
     0.608
ubaA
SAMP-activating enzyme E1; Likely activates multiple ubiquitin-like SAMPs for protein conjugation as well as for sulfur transfer, via ATP-dependent adenylation at their C-terminus. In fact, it is required for the formation of all three SAMP1-, SAMP2-and SAMP3-protein conjugates, and for molybdenum cofactor (MoCo) biosynthesis and thiolation of tRNAs. Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence=; Note=Binds 1 zinc ion per subunit; protein SAMP2. Also sampylated with SAMP1. sampylation, i.e. SAMP-protein conjugates. Moreover, they do not grow anaerobically with DMSO and do not show DMS [...]
 
     0.606
SCM55226.1
Putative protein {ECO:0000313|EMBL:CEA14756,1}; tr|A0A098BXG9|A0A098BXG9_9PORP;evalue=6e-083; PctID=88.40; score=312.
       0.540
SCM55222.1
Putative protein {ECO:0000313|EMBL:CEA14744,1}; tr|A0A098BYZ6|A0A098BYZ6_9PORP;evalue=0.0; PctID=97.73; score=790.
 
     0.479
SCM55248.1
Putative integrase/recombinase protein {ECO:0000313|EMBL:CEA14773,1}; tr|A0A098BW24|A0A098BW24_9PORP;evalue=0.0; PctID=96.87; score=745.
  
     0.451
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.