STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xyl3AXylan 1,4-beta-xylosidase {ECO:0000250|UniProtKB:P45702}; Involved in degradation of plant cell wall polysaccharides. Has beta-xylosidase activity via its capacity to hydrolyze glycosidic linkages of beta-1,4-xylo-oligosaccharides of various lengths (X2 to X6), releasing xylose monomers. To a much lesser extent, also has alpha-L-arabinofuranosidase activity. Does not possess beta-D-glucosidase activity. Acts synergistically with Xyn10D-Fae1A to increase the release of xylose from xylan. successive D-xylose residues from the non-reducing termini. arabinofuranoside residues in alpha-L-ar [...] (122 aa)    
Predicted Functional Partners:
SCM55249.1
Glycosyl hydrolase family 109 protein; Glycosidase. Name=NAD(+); Xref=ChEBI:CHEBI:57540; Evidence=; Note=Binds 1 NAD(+) per subunit. The NAD(+) cannot dissociate; the signal peptide cleavage has not been experimentally proven. 109 subfamily; sp|A1S4U5|GH109_SHEAM;evalue=5e-007; PctID=23.91; score=56.2.
       0.774
xylE
D-xylose-proton symporter; Uptake of D-xylose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Glucose is not transported, but can compete for xylose binding sites and can inhibit xylose transport (in vitro); Multi-pass membrane protein accumulate sugar against a concentration gradient: the XylE system which utilizes the electrochemical gradient of protons and that is insensitive to cold osmotic shock and the XylF system that uses a high-energy phosphate compound and is sensitive to cold osmotic shock. transporter (TC 2.A.1.1) famil [...]
       0.485
xylA
Xylose isomerase {ECO:0000255|HAMAP-Rule:MF_00455}; sp|A6L792|XYLA_BACV8;evalue=0.0; PctID=78.62; score=709; Belongs to the xylose isomerase family.
     
 0.416
xyl3A-2
Xylan 1,4-beta-xylosidase {ECO:0000250|UniProtKB:P45702}; Involved in degradation of plant cell wall polysaccharides. Has beta-xylosidase activity via its capacity to hydrolyze glycosidic linkages of beta-1,4-xylo-oligosaccharides of various lengths (X2 to X6), releasing xylose monomers. To a much lesser extent, also has alpha-L-arabinofuranosidase activity. Does not possess beta-D-glucosidase activity. Acts synergistically with Xyn10D-Fae1A to increase the release of xylose from xylan. successive D-xylose residues from the non-reducing termini. arabinofuranoside residues in alpha-L-ar [...]
 
    
0.410
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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