STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
obgGTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; superfamily. OBG GTPase family. domain; sp|C0QX49|OBG_BRAHW;evalue=4e-018; PctID=32.98; score=92.0. (259 aa)    
Predicted Functional Partners:
obg-2
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
 
    0.870
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.738
yqaA
Inner membrane protein YqaA; sp|P0ADR0|YQAA_ECOLI, sp|P0ADR1|YQAA_SHIFL;evalue=9e-016; PctID=34.04; score=82.8.
 
     0.738
pcm
Protein-L-isoaspartate O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00090}; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
   
    0.518
SPS2
Solanesyl diphosphate synthase 2, chloroplastic; Involved in providing solanesyl diphosphate for plastoquinone-9 formation. Prefers geranylgeranyl diphosphate to farnesyl diphosphate as substrate. No activity with geranyl diphosphate or dimethylallyl diphosphate as substrate. diphosphate = 5 diphosphate + all-trans-nonaprenyl diphosphate. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; Note=Binds 3 Mg(2+) ions per subunit; Kinetic parameters: KM=6.89 uM for farnesyl diphosphate (in the presence of 500 uM of isopentenyl diphosphate); KM=0.843 uM for geranylgeranyl diphosphate (in the pr [...]
       0.488
hisB
Histidine biosynthesis bifunctional protein HisB {ECO:0000255|HAMAP-Rule:MF_01022}; sp|Q7MLS4|HIS7_VIBVY;evalue=2e-101; PctID=51.52; score=369; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
   
   0.444
SCM57684.1
Putative protein {ECO:0000313|EMBL:CEA15838,1}; tr|A0A098C090|A0A098C090_9PORP;evalue=0.0; PctID=63.49; score=731.
  
    0.440
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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