STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM55386.1Putative protein {ECO:0000313|EMBL:CEA17027,1}; tr|A0A098C535|A0A098C535_9PORP;evalue=7e-160; PctID=63.76; score=570. (436 aa)    
Predicted Functional Partners:
yhaQ
Putative ABC transporter ATP-binding protein YhaQ; sp|C0SPB4|YHAQ_BACSU;evalue=1e-056; PctID=39.73; score=220.
  
 0.964
dusB
tRNA-dihydrouridine synthase B {ECO:0000255|HAMAP-Rule:MF_02042}; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.743
SCM55387.1
Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. alcohol; sp|P49713|FUCO_CAEEL;evalue=5e-013; PctID=31.58; score=77.0.
       0.741
SCM55389.1
Hypothetical protein; Evalue=; PctID=; score=.
       0.591
dnaG
DNA primase {ECO:0000255|HAMAP-Rule:MF_00974}; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.507
yuxL
Putative peptidase YuxL; sp|P39839|YUXL_BACSU;evalue=4e-028; PctID=23.03; score=127.
  
     0.462
SCM59444.1
Putative protein {ECO:0000313|EMBL:CEA15058,1}; tr|A0A098BY28|A0A098BY28_9PORP;evalue=2e-051; PctID=68.71; score=207.
  
     0.452
zraS
Sensor protein ZraS; Member of the two-component regulatory system ZraS/ZraR. May function as a membrane-associated protein kinase that phosphorylates ZraR in response to high concentrations of zinc or lead in the medium. phospho-L-histidine; Multi-pass membrane protein of the labile hydrogenase activity; sp|P14377|ZRAS_ECOLI;evalue=6e-017; PctID=32.39; score=89.0.
 
 
   0.436
SCM59282.1
Putative protein {ECO:0000313|EMBL:CEA17133,1}; tr|A0A098C3Z4|A0A098C3Z4_9PORP;evalue=1e-155; PctID=58.74; score=556.
  
     0.407
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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