STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
insF1-1Involved in the transposition of the insertion sequence IS3; sp|P0CF79|INSF1_ECOLI,sp|P0CF80|INSF2_ECOLI, sp|P0CF81|INSF3_ECOLI,sp|P0CF82|INSF4_ECOLI, sp|P0CF83|INSF5_ECOLI,sp|P0CF84|INSF6_ECOLI, sp|P0CF85|INSF_ECO11;evalue=4e-044; PctID=38.72; score=178. (279 aa)    
Predicted Functional Partners:
insD1-3
Transposase InsD for insertion element IS2A; Involved in the transposition of the insertion sequence IS2; sp|P0CF53|INSD1_ECOLI,sp|P0CF54|INSD2_ECOLI, sp|P0CF55|INSD3_ECOLI,sp|P0CF56|INSD4_ECOLI, sp|P0CF57|INSD5_ECOLI,sp|P0CF58|INSD6_ECOLI, sp|P0CF59|INSD7_ECOLI,sp|P0CF62|IND10_ECOLI, sp|P0CF63|IND11_ECOLI, sp|P0CF64|IND12_ECOLI;evalue=5e-012; PctID=27.06; score=72.4.
  
     0.739
insD1-1
Transposase InsD for insertion element IS2A; Involved in the transposition of the insertion sequence IS2; sp|P0CF53|INSD1_ECOLI,sp|P0CF54|INSD2_ECOLI, sp|P0CF55|INSD3_ECOLI,sp|P0CF56|INSD4_ECOLI, sp|P0CF57|INSD5_ECOLI,sp|P0CF58|INSD6_ECOLI, sp|P0CF59|INSD7_ECOLI,sp|P0CF62|IND10_ECOLI, sp|P0CF63|IND11_ECOLI, sp|P0CF64|IND12_ECOLI;evalue=1e-011; PctID=26.95; score=71.2.
  
     0.728
insD1-2
Transposase InsD for insertion element IS2A; Involved in the transposition of the insertion sequence IS2; sp|P0CF53|INSD1_ECOLI,sp|P0CF54|INSD2_ECOLI, sp|P0CF55|INSD3_ECOLI,sp|P0CF56|INSD4_ECOLI, sp|P0CF57|INSD5_ECOLI,sp|P0CF58|INSD6_ECOLI, sp|P0CF59|INSD7_ECOLI,sp|P0CF62|IND10_ECOLI, sp|P0CF63|IND11_ECOLI, sp|P0CF64|IND12_ECOLI;evalue=1e-011; PctID=26.95; score=71.2.
  
     0.728
SCM55426.1
Transposase {ECO:0000313|EMBL:KFF24117,1}; tr|A0A086B5A3|A0A086B5A3_9FLAO;evalue=9e-024; PctID=58.59; score=115.
 
  
 0.727
SCM55424.1
Putative protein ORF8 in nfe locus; sp|Q52991|YNF8_RHIML;evalue=4e-030; PctID=39.89; score=131.
  
    0.592
SCM55423.1
Putative protein {ECO:0000313|EMBL:BAR51173,1}; tr|A0A0E4BGI4|A0A0E4BGI4_TANFO;evalue=4e-090; PctID=77.57; score=337.
  
    0.447
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.