STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpFN-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000255|HAMAP-Rule:MF_00135}; sp|A6L7N0|TRPF_BACV8;evalue=7e-053; PctID=50.00; score=206; Belongs to the TrpF family. (203 aa)    
Predicted Functional Partners:
trpC
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; sp|Q8AAD6|TRPC_BACTN;evalue=2e-062; PctID=49.04; score=239; Belongs to the TrpC family.
 
 0.999
trpD
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 
 0.999
trpB
Tryptophan synthase beta chain {ECO:0000255|HAMAP-Rule:MF_00133}; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.998
trpA
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
  
 0.997
SCM55665.1
Putative anthranilate synthase component II; sp|P44339|Y1171_HAEIN;evalue=2e-036; PctID=41.40; score=152.
 
  
 0.992
trpE
Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations o [...]
 
  
 0.978
SCM59606.1
Putative PabA-like protein HI_1170; sp|Q57527|Y1170_HAEIN;evalue=6e-073; PctID=47.30; score=274.
 
  
 0.850
hisI
Histidine biosynthesis bifunctional protein HisIE {ECO:0000255|HAMAP-Rule:MF_01019}; sp|Q8A7Z7|HIS2_BACTN;evalue=9e-055; PctID=55.10; score=213; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.591
SCM55656.1
Putative protein {ECO:0000313|EMBL:CEA16860,1}; tr|A0A098C1S7|A0A098C1S7_9PORP;evalue=3e-090; PctID=61.87; score=338.
     
 0.561
trpB2
Tryptophan synthase beta chain 2; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
    
 0.538
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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