STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
estDEsterase EstD {ECO:0000312|EMBL:AHD17901,1}; Exhibits significant esterase activity with a preference for short acyl chain esters (C4-C8) in vitro. Its physiological function is not known. Displays neither proteolytic activity using casein as substrate, nor peptidase activity when assayed with L-leucine p-nitroanilide and L-proline p-nitroanilide. carboxylate. fluoride, a serine protease inhibitor, and by mercury chloride. Diethyl pyrocarbonate, a histidine modifier, also inhibits the reaction, albeit less pronounced than phenylmethylsulfonyl fluoride. EDTA and dithiothreitol have no e [...] (464 aa)    
Predicted Functional Partners:
rlmH
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.773
nadC
Putative nicotinate-nucleotide pyrophosphorylase; Involved in the catabolism of quinolinic acid (QA). + CO(2) = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate. ribonucleotide from quinolinate: step 1/1; sp|P77938|NADC_RHORU;evalue=7e-055; PctID=43.49; score=214; Belongs to the NadC/ModD family.
       0.523
comEB
ComE operon protein 2; Dispensable for transformability. Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence=; family; sp|P32393|COMEB_BACSU;evalue=1e-017; PctID=36.17; score=88.2.
       0.492
yqgN
Putative protein YqgN; sp|P54491|YQGN_BACSU;evalue=4e-014; PctID=29.12; score=77.8; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.465
SCM55754.1
Putative CtpA-like serine protease; sp|Q4L6D0|CTPAL_STAHJ;evalue=4e-048; PctID=33.80; score=193; Belongs to the peptidase S41A family.
       0.449
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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