STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM55873.1Putative lipoprotein {ECO:0000313|EMBL:BAR48659,1}; tr|A0A0E4FKP5|A0A0E4FKP5_TANFO;evalue=8e-082; PctID=58.78; score=310. (270 aa)    
Predicted Functional Partners:
SCM55871.1
Putative lipoprotein {ECO:0000313|EMBL:CEA16663,1}; tr|A0A098C2M3|A0A098C2M3_9PORP;evalue=0.0; PctID=76.89; score=759.
       0.792
SCM55875.1
SusD family protein {ECO:0000313|EMBL:BAR48658,1}; tr|A0A0E4BCL2|A0A0E4BCL2_TANFO, tr|A0A0E4BGN6|A0A0E4BGN6_TANFO;evalue=0.0; PctID=67.59; score=710.
       0.714
bglX
Periplasmic beta-glucosidase; sp|Q56078|BGLX_SALTY;evalue=3e-085; PctID=39.77; score=317; Belongs to the glycosyl hydrolase 3 family.
       0.639
susC19
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-055; PctID=35.15; score=219.
       0.538
menB
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000255|HAMAP-Rule:MF_01934}; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).
       0.475
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
       0.475
vibC
Vibriobactin-specific isochorismate synthase; sp|O07898|VIBC_VIBCH;evalue=7e-017; PctID=32.63; score=88.6.
       0.475
menI
1,4-dihydroxy-2-naphthoyl-CoA hydrolase {ECO:0000255|HAMAP-ECO:0000305}; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA). Also shows significant activity toward a wide range of acyl-CoA thioesters, and minimal activity toward benzoyl-holoEntB. dihydroxy-2-naphthoate + CoA. Kinetic parameters: KM=2.5 uM for 1,4-dihydroxy-2-naphthoyl-CoA; KM=8 uM for 1,4-dihydroxy-2-naphthoyl-CoA; KM=1.3 uM for oleoyl-CoA; KM=1.5 uM for myristoyl-CoA; KM=1.559 uM for acetyl-CoA; KM=1.9 uM for palmitoyl-CoA; KM=2.2 uM for lauroyl-CoA; KM=8.0 uM for [...]
       0.475
SCM55855.1
O-succinylbenzoate synthase {ECO:0000256|SAAS:SAAS00322575}; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB). diene-1-carboxylate = 2-succinylbenzoate + H(2)O. biosynthesis; 1,4-dihydroxy-2-naphthoate from chorismate: step 4/7. EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data; tr|A0A0F5J0K3|A0A0F5J0K3_9PORP;evalue=5e-090; PctID=54.31; score=338.
       0.466
menC
O-succinylbenzoate synthase {ECO:0000255|HAMAP-Rule:MF_00470}; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 2-succinylbenzoate (OSB). diene-1-carboxylate = 2-succinylbenzoate + H(2)O. Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240; Evidence=; biosynthesis; 1,4-dihydroxy-2-naphthoate from chorismate: step 4/7. enzyme family. MenC type 1 subfamily; sp|A6TBV5|MENC_KLEP7;evalue=2e-007; PctID=26.70; score=57.4.
       0.466
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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