STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumAFumarate hydratase class I, aerobic {ECO:0000303|}; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (546 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00487}; Catalyzes the reversible oxidation of malate to oxaloacetate; sp|Q8ZVB2|MDH_PYRAE;evalue=6e-019; PctID=33.05; score=95.1; Belongs to the LDH/MDH superfamily.
  
 
 0.994
SCM59825.1
Succinate dehydrogenase {ECO:0000313|EMBL:KGN98980,1}; tr|A0A0A2G9B6|A0A0A2G9B6_9PORP;evalue=4e-108; PctID=75.30; score=397.
  
 
 0.984
sdhA
Succinate dehydrogenase flavoprotein subunit; sp|P08065|SDHA_BACSU;evalue=8e-037; PctID=31.99; score=155.
  
 
 0.979
maeB
NADP-dependent malic enzyme; sp|Q9ZFV8|MAO2_SALTY;evalue=0.0; PctID=47.50; score=649.
 
 
 0.975
gltA
Citrate synthase; sp|Q59977|CISY_SYNY3;evalue=7e-030; PctID=33.87; score=132; Belongs to the citrate synthase family.
  
 
 0.961
gcvP
Glycine dehydrogenase (decarboxylating) {ECO:0000255|HAMAP-Rule:MF_00711}; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.953
SCM59823.1
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ADQ81109,1}; tr|E4T0P5|E4T0P5_PALPW;evalue=1e-077; PctID=61.50; score=295.
    
 0.915
icd1
Isocitrate dehydrogenase [NADP]; sp|Q5HNL1|IDH_STAEQ, sp|Q8CNX4|IDH_STAES;evalue=9e-134; PctID=58.44; score=477.
  
  
 0.863
icd3
Isocitrate dehydrogenase [NADP]; sp|P50215|IDH_SPHYA;evalue=8e-169; PctID=68.97; score=593; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
  
 0.863
argH
Argininosuccinate lyase {ECO:0000255|HAMAP-Rule:MF_00006}; sp|Q8A1D3|ARLY_BACTN;evalue=3e-141; PctID=56.91; score=501.
    
 0.861
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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