STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56090.1Putative protein {ECO:0000313|EMBL:BAR52018,1}; tr|A0A0E4FP30|A0A0E4FP30_TANFO;evalue=6e-107; PctID=59.93; score=394. (317 aa)    
Predicted Functional Partners:
SCM56092.1
Putative protein AF_0417; sp|O29830|Y417_ARCFU;evalue=3e-008; PctID=31.62; score=59.3.
       0.527
SCM56094.1
Putative protein {ECO:0000313|EMBL:EFK38138,1}; tr|D7VU92|D7VU92_9FLAO;evalue=3e-069; PctID=56.03; score=267.
       0.527
SCM56096.1
Putative protein {ECO:0000313|EMBL:EFK38137,1}; tr|D7VU91|D7VU91_9FLAO;evalue=6e-048; PctID=51.87; score=196.
       0.527
SCM56097.1
Serine protease with a broad substrate specificity. for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides. 10% Triton X-100 or 10% Tween-20. Fully active although less stable in the presence of 10 mM EDTA. Activity not affected by the absence or presence of 10 mM CaCl(2). Unstable in the presence of 2 M or over GdnHCl and loses 35% and 99% of its activity upon incubation with 2 and 4 M GdnHCl, respectively, for 1 hour at 55 degrees Celsius. Nearly fully loses activity upon incubation at pH 2.0. Kinetic parameters: KM=0.11 mM for N-succinyl-A [...]
  
    0.523
torS
Sensor protein TorS; Member of the two-component regulatory system TorS/TorR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Detects the presence of TMAO in the medium and, in response, activates TorR via a four-step phosphorelay. When TMAO is removed, TorS can dephosphorylate TorR, probably by a reverse phosphorelay involving His-860 and Asp-733. phospho-L-histidine. TorC apocytochrome; Multi-pass membrane protein group from a His in the primary transmitter domain, to an Asp in the receiver domain and to a His in the secondary transmitter domain. ProRule:PRU001 [...]
  
 
 0.466
tmoS1
Sensor histidine kinase TmoS; Member of the two-component regulatory system TmoS/TmoT involved in the regulation of toluene degradation. Probably phosphorylates TmoT via a four-step phosphorelay in response to toluene. Can also be induced by benzene and ethylbenzene. phospho-L-histidine. antagonists. Binding of agonists such as toluene or benzene to TmoS stimulates autophosphorylation. Toluene causes the most pronounced increase, followed by benzene, chlorobenzene and ethylbenzene. Activity is inhibited by antagonists such as o-xylene, o-chlorotoluene and trimethylbenzene isomers, whic [...]
  
 
 0.459
dhkD
Acts as a receptor histidine kinase for a signal transduction pathway. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain (By similarity). phospho-L-histidine. kinase/receiver domain modules. Sequence=AAB84171.1; Type=Frameshift; Positions=703; Evidence=; sp|Q54SP4|DHKD_DICDI;evalue=5e-024; PctID=27.27; score=114.
  
 
 0.459
silS
Putative sensor kinase SilS; Component of the sil cation-efflux system that confers resistance to silver. probable member of a two-component regulatory system SilS/SilR. May activate SilR by phosphorylation. phospho-L-histidine. pass membrane protein ProRule:PRU00102}; sp|Q9ZHD4|SILS_SALTM;evalue=5e-018; PctID=24.89; score=94.7.
  
 
 0.459
yycG
Sensor histidine kinase YycG; Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. phospho-L-histidine. membrane protein down at the entry into stationary phase. inhibited the incorporation of phosphate from ATP at 50 ug/ml. The zerumbone derivative NH0891 inhibited YycG. ProRule:PRU00102}; sp|Q45614|YYCG_BACSU;evalue=7e-027; PctID=32.54; score=124.
  
 
 0.459
SCM56088.1
Putative protein ORF8 in nfe locus; sp|Q52991|YNF8_RHIML;evalue=1e-031; PctID=40.74; score=138.
       0.448
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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