STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56245.1Putative protein {ECO:0000313|EMBL:EIY54596,1}; tr|I9SF91|I9SF91_9BACE;evalue=0.0; PctID=65.12; score=880. (647 aa)    
Predicted Functional Partners:
susC25
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-032; PctID=34.38; score=142.
 
 
   0.947
susC29
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=6e-036; PctID=36.63; score=153.
 
 
   0.804
susC39
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=7e-029; PctID=33.48; score=130.
 
 
   0.804
susC43
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=3e-036; PctID=38.05; score=154.
 
 
   0.804
susC45
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=4e-034; PctID=37.67; score=147.
 
 
   0.804
susC81
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-037; PctID=27.96; score=159.
 
 
   0.804
susC71
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-023; PctID=31.39; score=113.
  
 
   0.800
susC59
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-021; PctID=27.63; score=106.
 
 
   0.784
nedA3
Sialidase; To release sialic acids for use as carbon and energy sources for this non-pathogenic bacterium while in pathogenic microorganisms, sialidases have been suggested to be pathogenic factors. alpha-(2->8)-glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. acid. ProRule:PRU00081}; sp|Q02834|NANH_MICVI;evalue=9e-007; PctID=30.23; score=55.1.
  
    0.780
susC73
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=1e-028; PctID=33.33; score=129.
 
     0.776
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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