STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56620.1Putative protein {ECO:0000313|EMBL:CEA15891,1}; tr|A0A098C0E5|A0A098C0E5_9PORP;evalue=3e-032; PctID=93.33; score=143. (75 aa)    
Predicted Functional Partners:
insD1-1
Transposase InsD for insertion element IS2A; Involved in the transposition of the insertion sequence IS2; sp|P0CF53|INSD1_ECOLI,sp|P0CF54|INSD2_ECOLI, sp|P0CF55|INSD3_ECOLI,sp|P0CF56|INSD4_ECOLI, sp|P0CF57|INSD5_ECOLI,sp|P0CF58|INSD6_ECOLI, sp|P0CF59|INSD7_ECOLI,sp|P0CF62|IND10_ECOLI, sp|P0CF63|IND11_ECOLI, sp|P0CF64|IND12_ECOLI;evalue=1e-011; PctID=26.95; score=71.2.
       0.773
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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