STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56715.1Putative protein {ECO:0000313|EMBL:EDM19882,1}; tr|A5ZJQ2|A5ZJQ2_9BACE,tr|R5U483|R5U483_9BACE; evalue=1e-013; PctID=40.43; score=81.3. (94 aa)    
Predicted Functional Partners:
SCM56711.1
Putative protein {ECO:0000313|EMBL:EHL82917,1}; tr|G9S636|G9S636_9PORP,tr|R7DGA8|R7DGA8_9PORP; evalue=5e-032; PctID=38.53; score=143.
      0.763
SCM56717.1
Putative protein {ECO:0000313|EMBL:EKN15371,1}; tr|K5ZV60|K5ZV60_9PORP,tr|S0GM76|S0GM76_9PORP; evalue=8e-171; PctID=51.82; score=607.
  
    0.713
susC33
TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=8e-020; PctID=26.92; score=100.
       0.705
SCM56721.1
Putative protein {ECO:0000313|EMBL:EKN15373,1}; tr|K6AI16|K6AI16_9PORP;evalue=2e-074; PctID=41.62; score=286.
  
    0.643
SCM56713.1
Putative protein ORF8 in nfe locus; sp|Q52991|YNF8_RHIML;evalue=1e-031; PctID=40.74; score=138.
       0.513
SCM56709.1
Putative protein {ECO:0000313|EMBL:KKB56849,1}; tr|A0A0F5JGF2|A0A0F5JGF2_9PORP, tr|S0GPU7|S0GPU7_9PORP;evalue=1e-027; PctID=39.64; score=131.
       0.404
ybfL1
Putative protein YbfL; sp|P75741|YBFL_ECOLI;evalue=3e-064; PctID=41.40; score=245.
       0.401
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.