STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56762.1Transporter, MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CEA16323,1}; tr|A0A098C1N0|A0A098C1N0_9PORP;evalue=2e-079; PctID=71.17; score=301. (230 aa)    
Predicted Functional Partners:
SCM56760.1
Putative protein {ECO:0000313|EMBL:CEA16324,1}; tr|A0A098C077|A0A098C077_9PORP;evalue=1e-051; PctID=77.04; score=207.
 
 
 0.987
SCM56758.1
Putative protein {ECO:0000313|EMBL:CEA16325,1}; tr|A0A098C0B0|A0A098C0B0_9PORP;evalue=3e-035; PctID=57.58; score=155.
 
 
 0.954
SCM59739.1
Putative protein {ECO:0000313|EMBL:CEA16382,1}; tr|A0A098C3A0|A0A098C3A0_9PORP;evalue=7e-059; PctID=80.14; score=232.
 
 
 0.832
SCM59738.1
Putative protein {ECO:0000313|EMBL:CEA16383,1}; tr|A0A098C1U3|A0A098C1U3_9PORP;evalue=7e-062; PctID=60.29; score=243.
 
 
 0.827
SCM59732.1
Protein TonB {ECO:0000256|RuleBase:RU362123}; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.783
pdxJ
Pyridoxine 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00279}; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.
 
     0.760
lptB
Lipopolysaccharide export system ATP-binding protein LptB; Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane. Probably responsible for energy coupling to the transport system (By similarity). assembly complex. The LptBFG transporter is composed of two ATP-binding proteins and two transmembrane proteins (LptF and LptG) (By similarity); Peripheral membrane protein; Cytoplasmic side membrane lipopolysaccharide export (TC 1.B.42) family; sp|P24693|LPTB_ACIFR;evalue=4e-071; PctID=53.78; score=268.
 
   
 0.754
SCM59477.1
Putative secreted protein {ECO:0000313|EMBL:CEA15520,1}; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.733
lpxA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
  
 0.719
SCM59194.1
Putative protein {ECO:0000313|EMBL:CEA15091,1}; tr|A0A098BY48|A0A098BY48_9PORP;evalue=0.0; PctID=67.97; score=1397.
 
  
 0.698
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.