STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM56984.1Cupin domain protein {ECO:0000313|EMBL:BAR49750,1}; tr|A0A0E3VQ41|A0A0E3VQ41_TANFO, tr|A0A0E3VRQ3|A0A0E3VRQ3_TANFO,tr|G8ULS5|G8ULS5_TANFA; evalue=2e-035; PctID=66.67; score=153. (108 aa)    
Predicted Functional Partners:
SCM56982.1
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:AEW20577,1}; tr|G8ULS4|G8ULS4_TANFA;evalue=9e-168; PctID=69.76; score=596.
 
     0.815
hcp
Hydroxylamine reductase {ECO:0000255|HAMAP-Rule:MF_00069}; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.783
etrA
Electron transport regulator A; Regulates anaerobic growth on fumarate, nitrite, Fe(3+), TMAO, DMSO, thiosulfate and sulfite, but not on nitrate nor Mn(4+). (possibly iron); sp|P46148|ETRA_SHEON;evalue=2e-007; PctID=21.53; score=55.8.
  
  
 0.536
yvoA
Acts as a weak repressor of yflG expression. YflG activity; sp|O34817|YVOA_BACSU;evalue=3e-017; PctID=28.63; score=89.0.
  
    0.505
SCM59757.1
Transcriptional regulator {ECO:0000313|EMBL:GAE85206,1}; tr|W4UW88|W4UW88_9BACE;evalue=2e-101; PctID=55.21; score=375.
  
    0.505
cobB
NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. acetyl-ADP-ribose + a protein. succinyl-ADP-ribose + a protein. hydrophobic pocket are probably involved in substrate specificity. They are important for desuccinylation activity, but dispensable for deacetylation activity; sp|Q8A3H9|NPD_BACTN;evalue=9e-076; PctID=62.01; score=283; Belongs to the sirtuin family. Class III subfamily.
  
    0.422
nadD
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00244}; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.410
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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