STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvnBPutative protein YvnB; sp|O34986|YVNB_BACSU;evalue=1e-007; PctID=35.05; score=57.8. (318 aa)    
Predicted Functional Partners:
SCM57062.1
Putative protein {ECO:0000313|EMBL:CEA16351,1}; tr|A0A098C1Q9|A0A098C1Q9_9PORP;evalue=0.0; PctID=66.83; score=840.
       0.759
wxcX1
Putative protein WxcX; sp|B0RVK2|WXCX_XANCB, sp|P0C7J1|WXCX_XANCP;evalue=1e-008; PctID=32.95; score=61.2.
       0.628
SCM59419.1
HI0933 family protein {ECO:0000313|EMBL:AEL27501,1}; tr|G0J475|G0J475_CYCMS;evalue=0.0; PctID=48.96; score=1040.
  
     0.564
SCM55719.1
Putative protein {ECO:0000313|EMBL:EON77073,1}; tr|R7ZSQ1|R7ZSQ1_9BACT;evalue=8e-077; PctID=44.72; score=294.
  
     0.549
SCM57067.1
Putative protein {ECO:0000313|EMBL:EPC05138,1}; tr|S2LJJ6|S2LJJ6_9FIRM;evalue=3e-029; PctID=29.85; score=135.
       0.541
SCM56488.1
Putative protein {ECO:0000313|EMBL:KKB59452,1}; tr|A0A0F5JPV6|A0A0F5JPV6_9PORP;evalue=3e-116; PctID=49.35; score=425.
  
     0.474
SCM55568.1
Sialidase {ECO:0000313|EMBL:AHF14608,1}; tr|W0EYG3|W0EYG3_9SPHI;evalue=3e-128; PctID=59.68; score=465.
  
     0.445
SCM55487.1
Putative protein {ECO:0000313|EMBL:EKN10807,1}; tr|K5YBS0|K5YBS0_9PORP;evalue=0.0; PctID=77.41; score=1014.
  
     0.443
SCM59676.1
Putative protein {ECO:0000313|EMBL:EIY68914,1}; tr|I9I7D6|I9I7D6_BACOV;evalue=1e-123; PctID=68.35; score=449.
  
     0.403
SCM57069.1
Putative protein {ECO:0000313|EMBL:EKN06907,1}; tr|K5Y1H1|K5Y1H1_9PORP;evalue=0.0; PctID=52.30; score=784.
       0.402
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.