STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM57216.1Putative protein {ECO:0000313|EMBL:CEA16612,1}; tr|A0A098C3X2|A0A098C3X2_9PORP;evalue=1e-061; PctID=60.00; score=244. (415 aa)    
Predicted Functional Partners:
ccsA
Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. Rule:MF_01391}; Multi-pass membrane protein; sp|P31564|CCSA_GALSU;evalue=5e-023; PctID=42.34; score=108.
  
  
 0.927
nrfA
Cytochrome c-552 {ECO:0000255|HAMAP-Rule:MF_01182}; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
  
  
 0.824
nrfH
Cytochrome c-type protein NrfH; Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit. pass membrane protein; Periplasmic side; sp|Q9S1E6|NRFH_WOLSU;evalue=9e-037; PctID=41.25; score=153.
  
  
 0.761
nrfI
Protein NrfI; May play a role in cytochrome c biogenesis and may be required for maturation of the NrfA protein. membrane protein CcmF/CycK/Ccl1/NrfE/CcsA family; sp|Q9S1E4|NRFI_WOLSU;evalue=7e-096; PctID=32.26; score=352.
  
  
 0.674
SCM57223.1
Putative protein {ECO:0000313|EMBL:BAR52018,1}; tr|A0A0E4FP30|A0A0E4FP30_TANFO;evalue=4e-107; PctID=60.26; score=394.
       0.585
SCM58383.1
Putative protein {ECO:0000313|EMBL:EIZ00658,1}; tr|I9BLA5|I9BLA5_BACFG;evalue=5e-073; PctID=64.19; score=280.
  
  
 0.507
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.