STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000255|HAMAP-Rule:MF_00766}; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (229 aa)    
Predicted Functional Partners:
alaS-2
Alanine-tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. diphosphate + L-alanyl-tRNA(Ala). Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence=; Note=Binds 1 zinc ion per subunit; domain, the editing domain and the C-terminal C-Ala domain. The editing domain removes incorrectly charged amino acids, while the C-Ala domain, along with [...]
       0.758
mrdA
Penicillin-binding protein 2; Cell wall formation; PBP-2 is responsible for the determination of the rod shape of the cell. Its synthesize cross-linked peptidoglycan from the lipid intermediates (By similarity). pass membrane protein (formation of linear glycan strands) and a penicillin-sensitive transpeptidase domain (cross-linking of the peptide subunits); sp|E1WGF1|PBP2_SALTS,sp|P0CL14|PBP2_SALTY;evalue=7e-038; PctID=31.78; score=159.
 
 
 
 0.743
SCM57782.1
Putative protein {ECO:0000313|EMBL:CEA16070,1}; tr|A0A098BZF4|A0A098BZF4_9PORP;evalue=7e-112; PctID=47.22; score=410.
       0.645
mrdB
Rod shape-determining protein RodA; Required for the maintenance of the rod cell shape. Required for the expression of the enzymatic activity of the penicillin-binding protein 2 (PBP2). protein; sp|P0ABG7|RODA_ECOLI,sp|P0ABG8|RODA_ECO57, sp|P0ABG9|RODA_SHIFL;evalue=5e-029; PctID=43.04; score=129; Belongs to the SEDS family.
 
 
 
 0.640
SCM59280.1
Putative protein {ECO:0000313|EMBL:CEA17135,1}; tr|A0A098C2J4|A0A098C2J4_9PORP;evalue=9e-063; PctID=61.20; score=245.
   
 
 0.636
SCM57866.1
Putative protein {ECO:0000313|EMBL:CEA15684,1}; tr|A0A098BYE1|A0A098BYE1_9PORP;evalue=2e-058; PctID=40.43; score=233.
   
 
 0.583
mreB
Involved in formation of the rod shape of the cell; sp|Q01465|MREB_BACSU;evalue=5e-077; PctID=45.29; score=288.
 
 
 0.553
SCM57768.1
Rod shape-determining protein MreC {ECO:0000313|EMBL:CEA16075,1}; tr|A0A098BZF9|A0A098BZF9_9PORP;evalue=1e-081; PctID=54.32; score=309.
  
 
 0.547
nreB
Oxygen sensor histidine kinase NreB; Member of the two-component regulatory system NreB/NreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxygen, probably at the conserved histidine residue, and transfers its phosphate group probably to a conserved aspartate residue of NreC. NreB/NreC activates the expression of the nitrate (narGHJI) and nitrite (nir) reductase operons, as well as the putative nitrate transporter gene narT. phospho-L-hist [...]
   
  
 0.527
mctR-2
Transcriptional regulatory protein MctR {ECO:0000305}; Member of the two-component regulatory system MctS/MctR, which activates mctP expression; sp|Q1M7A0|MCTR_RHIL3;evalue=8e-010; PctID=51.52; score=64.7.
     
 0.514
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.