STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM58509.1Putative protein {ECO:0000313|EMBL:EKN18280,1}; tr|K6A400|K6A400_9PORP;evalue=0.0; PctID=59.87; score=1326. (1033 aa)    
Predicted Functional Partners:
SCM59694.1
Polysaccharide lyase family 8, super-sandwich domain protein {ECO:0000313|EMBL:EDN85176,1}; tr|A7AIF9|A7AIF9_9PORP;evalue=3e-096; PctID=51.93; score=359.
 
    0.687
SCM59043.1
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; Catalyzes the conversion of L-arabinose to L-ribulose.
 
     0.649
SCM58511.1
Hypothetical protein.
       0.570
xylS
Alpha-xylosidase; Catalyzes the liberation of alpha-xylose from the non-reducing terminal glucose of xyloglucan oligosaccharides. Has high hydrolytic activity on the disaccharide isoprimeverose. Follows a retaining mechanism of substrate hydrolysis. xylose residues with release of alpha-D-xylose. Kinetic parameters: KM=17 mM for maltose; KM=3.45 mM for maltotriose; KM=28.9 mM for isoprimeverose; KM=1.72 mM for 4-nitrophenyl-beta-isoprimeveroside; pH dependence: Optimum pH is 5.5; Temperature dependence: Optimum temperature is 90 degrees Celsius.; sp|Q9P999|XYLS_SULSO;evalue=7e-027; Pct [...]
  
     0.522
SCM56503.1
Putative protein {ECO:0000313|EMBL:EHB93456,1}; tr|G5H5L7|G5H5L7_9BACT;evalue=0.0; PctID=67.42; score=696; Belongs to the glycosyl hydrolase 28 family.
 
    0.519
SCM59046.1
Alpha-L-rhamnosidase{ECO:0000313|EMBL:CEA16344, 1}; tr|A0A098C096|A0A098C096_9PORP;evalue=0.0; PctID=71.04; score=860.
 
     0.504
SCM55809.1
Outer membrane efflux protein {ECO:0000313|EMBL:BAR51577,1}; tr|A0A0E4BGH1|A0A0E4BGH1_TANFO;evalue=0.0; PctID=75.76; score=716.
  
   
 0.488
SCM55428.1
Alpha-L-rhamnosidase protein {ECO:0000313|EMBL:EKX97269,1}; tr|L1N1Y2|L1N1Y2_9BACT;evalue=3e-041; PctID=56.13; score=174.
  
     0.475
SCM58723.1
Putative protein {ECO:0000313|EMBL:CDF13891,1}; tr|R7NMG0|R7NMG0_9BACE;evalue=3e-145; PctID=47.07; score=522.
 
    0.460
SCM55487.1
Putative protein {ECO:0000313|EMBL:EKN10807,1}; tr|K5YBS0|K5YBS0_9PORP;evalue=0.0; PctID=77.41; score=1014.
 
   0.456
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.