STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM58733.1Putative protein y4hP; sp|P50360|Y4HP_RHISN;evalue=5e-024; PctID=33.33; score=112. (518 aa)    
Predicted Functional Partners:
SCM58735.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.881
SCM58737.1
Hypothetical protein; Evalue=; PctID=; score=.
       0.746
SCM58740.1
Uncultured bacterium extrachromosomal DNA RGI01500 {ECO:0000313|EMBL:CDL66524,1}; tr|W1I667|W1I667_9BACT;evalue=2e-140; PctID=58.19; score=506.
       0.574
SCM57304.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.529
SCM58098.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.529
SCM58107.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.529
SCM59792.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.529
SCM59804.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.529
SCM59709.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-008; PctID=28.18; score=58.2.
 
     0.526
SCM56308.1
Putative protein y4jC; sp|P55503|Y4JC_RHISN;evalue=2e-007; PctID=32.91; score=54.7.
 
     0.486
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.