STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
insD1-3Transposase InsD for insertion element IS2A; Involved in the transposition of the insertion sequence IS2; sp|P0CF53|INSD1_ECOLI,sp|P0CF54|INSD2_ECOLI, sp|P0CF55|INSD3_ECOLI,sp|P0CF56|INSD4_ECOLI, sp|P0CF57|INSD5_ECOLI,sp|P0CF58|INSD6_ECOLI, sp|P0CF59|INSD7_ECOLI,sp|P0CF62|IND10_ECOLI, sp|P0CF63|IND11_ECOLI, sp|P0CF64|IND12_ECOLI;evalue=5e-012; PctID=27.06; score=72.4. (349 aa)    
Predicted Functional Partners:
SCM58747.1
Putative protein {ECO:0000313|EMBL:CEA15891,1}; tr|A0A098C0E5|A0A098C0E5_9PORP;evalue=4e-042; PctID=94.62; score=176.
       0.773
insF1-2
Involved in the transposition of the insertion sequence IS3; sp|P0CF79|INSF1_ECOLI,sp|P0CF80|INSF2_ECOLI, sp|P0CF81|INSF3_ECOLI,sp|P0CF82|INSF4_ECOLI, sp|P0CF83|INSF5_ECOLI,sp|P0CF84|INSF6_ECOLI, sp|P0CF85|INSF_ECO11;evalue=6e-044; PctID=38.72; score=177.
  
     0.741
insF1-3
Involved in the transposition of the insertion sequence IS3; sp|P0CF79|INSF1_ECOLI,sp|P0CF80|INSF2_ECOLI, sp|P0CF81|INSF3_ECOLI,sp|P0CF82|INSF4_ECOLI, sp|P0CF83|INSF5_ECOLI,sp|P0CF84|INSF6_ECOLI, sp|P0CF85|INSF_ECO11;evalue=6e-044; PctID=38.72; score=177.
  
     0.741
insF1-5
Involved in the transposition of the insertion sequence IS3; sp|P0CF79|INSF1_ECOLI,sp|P0CF80|INSF2_ECOLI, sp|P0CF81|INSF3_ECOLI,sp|P0CF82|INSF4_ECOLI, sp|P0CF83|INSF5_ECOLI,sp|P0CF84|INSF6_ECOLI, sp|P0CF85|INSF_ECO11;evalue=2e-045; PctID=39.03; score=182.
  
     0.740
insF1-1
Involved in the transposition of the insertion sequence IS3; sp|P0CF79|INSF1_ECOLI,sp|P0CF80|INSF2_ECOLI, sp|P0CF81|INSF3_ECOLI,sp|P0CF82|INSF4_ECOLI, sp|P0CF83|INSF5_ECOLI,sp|P0CF84|INSF6_ECOLI, sp|P0CF85|INSF_ECO11;evalue=4e-044; PctID=38.72; score=178.
  
     0.739
insF1-4
Involved in the transposition of the insertion sequence IS3; sp|P0CF79|INSF1_ECOLI,sp|P0CF80|INSF2_ECOLI, sp|P0CF81|INSF3_ECOLI,sp|P0CF82|INSF4_ECOLI, sp|P0CF83|INSF5_ECOLI,sp|P0CF84|INSF6_ECOLI, sp|P0CF85|INSF_ECO11;evalue=1e-038; PctID=36.84; score=160.
  
     0.736
nisX1-2
Transposase for insertion sequence element IS904; Involved in the transposition of the insertion sequence; sp|P35878|T904_LACLA;evalue=4e-024; PctID=31.70; score=111.
  
     0.607
SCM58751.1
Putative protein {ECO:0000313|EMBL:EGD34952,1}; tr|F0IDB4|F0IDB4_9FLAO;evalue=4e-029; PctID=46.92; score=133.
       0.584
SCM58753.1
Putative protein {ECO:0000313|EMBL:KKR32261,1}; tr|A0A0G0Q4H2|A0A0G0Q4H2_9BACT;evalue=2e-082; PctID=41.85; score=313.
       0.507
nisX1-1
Transposase for insertion sequence element IS904; Involved in the transposition of the insertion sequence; sp|P35878|T904_LACLA;evalue=2e-017; PctID=34.05; score=89.4.
  
     0.484
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.