STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM58829.1UPF0118 membrane protein; sp|O66948|Y740_AQUAE;evalue=2e-015; PctID=26.79; score=84.0. (374 aa)    
Predicted Functional Partners:
SCM58828.1
Putative protein {ECO:0000313|EMBL:CEA16152,1}; tr|A0A098C2N5|A0A098C2N5_9PORP;evalue=1e-025; PctID=72.37; score=121.
  
    0.690
perR
Peroxide operon regulator; Hydrogen and organic peroxide sensor. Represses the expression of a regulon of peroxide-inducible genes such as katA, ahpC, ahpF, the heme biosynthesis operon (hemAXCDBL), fur, perR, zosA and mrgA. Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Name=Fe(2+); Xref=ChEBI:CHEBI:29033; Note=Binds 1 Mn(2+) or Fe(2+) ion per subunit; Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Note=Binds 1 zinc ion per subunit.; in response to oxidative signaling may rapidly react with a Cys-SH to form a disulfide bond, leading to the loss of metal ion and inactivation of repressor function. Oxidize [...]
     
 0.576
SCM58827.1
Putative NADP-dependent dehydrogenase HI_1430; sp|P45200|Y1430_HAEIN;evalue=6e-053; PctID=46.15; score=207; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.496
dps
DNA protection during starvation protein; Responsible for protection of cells against peroxide, especially against hydrogen peroxide. Required for survival in host cells. Although it binds iron, it may not contribute to iron storage. The iron-loaded dps has DNA-binding activity. exposure to atomospheric oxygen in an OxyR-dependent manner; sp|B2RMG0|DPS_PORG3;evalue=1e-036; PctID=48.70; score=151.
       0.484
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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