STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM58840.1Lipid-binding putative hydrolase. (154 aa)    
Predicted Functional Partners:
SCM58839.1
Putative protein {ECO:0000313|EMBL:EFS29856,1}; tr|E5C809|E5C809_9BACE;evalue=2e-154; PctID=63.52; score=551.
       0.668
SCM58841.1
Putative protein {ECO:0000313|EMBL:AIZ40720,1}; tr|A0A0A7K3V0|A0A0A7K3V0_9FLAO;evalue=9e-041; PctID=33.67; score=174.
       0.668
cysD1
Transforms O-acetylhomoserine into homocysteine. methionine + acetate. Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326; sp|P50125|CYSD_EMENI;evalue=8e-028; PctID=30.68; score=125.
       0.503
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.