STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM58883.1Putative protein NMB0459; sp|Q9K0V1|Y459_NEIMB;evalue=1e-017; PctID=30.38; score=90.9. (371 aa)    
Predicted Functional Partners:
mod
Type III restriction-modification system EcoP15I enzyme mod; Binds the system-specific DNA recognition site 5'-CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's). adenosyl-L-homocysteine + DNA 6-methylaminopurine. homotetramer; sp|P12364|T3MO_ECOLX;evalue=9e-039; PctID=35.04; score=161.
       0.626
dnaK
Chaperone protein DnaK {ECO:0000255|HAMAP-Rule:MF_00332}; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.588
SCM58884.1
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:CDC41674,1}; tr|R6R8R6|R6R8R6_9FIRM;evalue=5e-062; PctID=53.28; score=243.
       0.499
SCM58881.1
Putative protein {ECO:0000313|EMBL:CEA16237,1}; tr|A0A098C2W9|A0A098C2W9_9PORP;evalue=3e-105; PctID=92.82; score=387.
       0.419
res
Type III restriction-modification system Bce10987IP enzyme res; This protein cuts the DNA outside of the recognition site. May also act as a helicase involved in unwinding DNA at the cleavage site. Protein only required for restriction but needs the presence of the modification enzyme (By similarity). specific double-stranded fragments with terminal 5'-phosphates. Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence=; system res protein family; sp|P25241|T3RE_BACC1;evalue=8e-020; PctID=38.33; score=100.
  
    0.409
SCM58892.1
Putative protein MJ0686; sp|Q58099|Y686_METJA;evalue=4e-021; PctID=31.58; score=103.
 
     0.406
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.