STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM58999.1Putative protein {ECO:0000313|EMBL:EKU88352,1}; tr|K9EBR5|K9EBR5_9BACE;evalue=2e-026; PctID=52.00; score=124. (125 aa)    
Predicted Functional Partners:
SCM58998.1
Putative transposase {ECO:0000313|EMBL:KDS11659,1}; tr|A0A078PLA8|A0A078PLA8_BACFG, tr|A0A081DUH4|A0A081DUH4_BACOV,tr|D6D6X9|D6D6X9_9BACE; evalue=6e-054; PctID=84.62; score=215.
  
    0.785
SCM59000.1
Hypothetical protein.
       0.636
SCM58997.1
Putative protein y4jD; sp|P55504|Y4JD_RHISN;evalue=8e-039; PctID=29.53; score=162.
  
    0.549
SCM59001.1
Uncultured bacterium extrachromosomal DNA RGI01500 {ECO:0000313|EMBL:CDL66524,1}; tr|W1I667|W1I667_9BACT;evalue=5e-146; PctID=57.58; score=524.
       0.412
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.