STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59407.1Putative protein {ECO:0000313|EMBL:GAO36065,1}; tr|A0A0E9MG53|A0A0E9MG53_9PROT;evalue=2e-013; PctID=45.71; score=82.8. (258 aa)    
Predicted Functional Partners:
SCM59405.1
Putative protein {ECO:0000313|EMBL:KFF18655,1}; tr|A0A086APP1|A0A086APP1_9FLAO;evalue=3e-007; PctID=38.36; score=60.5.
       0.577
aprN
Subtilisin is an extracellular alkaline serine protease, it catalyzes the hydrolysis of proteins and peptide amides. Subtilisin NAT also has fibrinolytic activity. for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides. Name=Ca(2+); Xref=ChEBI:CHEBI:29108; Evidence=; Note=Binds 2 calcium ions per subunit; Kinetic parameters: KM=0.48 mM for Suc-Ala-Ala-Pro-Phe-pNA; sporulation, and many mutations which block sporulation at early stages affect expression levels of subtilisin. However, subtilisin is not necessary for normal sporulation. fermenta [...]
       0.576
SCM59408.1
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL27567,1}; tr|G0J5D1|G0J5D1_CYCMS;evalue=0.0; PctID=72.80; score=810.
       0.401
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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