STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59508.1Putative membrane protein {ECO:0000313|EMBL:CEA16515,1}; tr|A0A098C0W2|A0A098C0W2_9PORP;evalue=5e-017; PctID=63.38; score=92.8. (72 aa)    
Predicted Functional Partners:
SCM59509.1
Putative protein {ECO:0000313|EMBL:CEA16514,1}; tr|A0A098C0Q7|A0A098C0Q7_9PORP;evalue=7e-065; PctID=57.14; score=253.
       0.756
pepD3
Cytosol non-specific dipeptidase; Dipeptidase with broad substrate specificity. Requires dipeptide substrates with an unblocked N-terminus and the amino group in the alpha or beta position. Non-protein amino acids and proline are not accepted in the C-terminal position, whereas some dipeptide amides and formyl amino acids are hydrolyzed. Also shows cysteinylglycinase activity, which is sufficient for E.coli to utilize cysteinylglycine as a cysteine source. hydrophobic dipeptides including prolyl amino acids. Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence=; Name=Co(2+); Xref=ChEBI:CHEBI: [...]
       0.500
SCM59510.1
Putative protein {ECO:0000313|EMBL:CEA16513,1}; tr|A0A098C280|A0A098C280_9PORP;evalue=6e-097; PctID=45.52; score=361.
       0.465
SCM59506.1
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:CEA16517,1}; tr|A0A098C3N2|A0A098C3N2_9PORP;evalue=2e-106; PctID=55.88; score=392.
       0.417
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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