STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59538.1Sigma-70 region 2 {ECO:0000313|EMBL:EOA11200,1}; tr|T2N9P8|T2N9P8_PORGN;evalue=2e-040; PctID=37.69; score=172. (275 aa)    
Predicted Functional Partners:
SCM59539.1
Putative protein {ECO:0000313|EMBL:BAR52018,1}; tr|A0A0E4FP30|A0A0E4FP30_TANFO;evalue=4e-107; PctID=60.26; score=394.
       0.500
SCM59537.1
Transposase IS4 family protein {ECO:0000313|EMBL:EHO40472,1}; tr|H1XU29|H1XU29_9BACT;evalue=6e-069; PctID=38.29; score=268.
       0.465
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.