STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59567.1Putative protein {ECO:0000313|EMBL:CDN32594,1}; tr|A0A060RED3|A0A060RED3_9BACT;evalue=1e-059; PctID=55.61; score=235. (207 aa)    
Predicted Functional Partners:
SCM59566.1
Putative protein {ECO:0000313|EMBL:CDN32593,1}; tr|A0A060RDX7|A0A060RDX7_9BACT;evalue=6e-108; PctID=68.75; score=396.
 
   
 0.955
SCM59643.1
Putative protein {ECO:0000313|EMBL:KKQ31971,1}; tr|A0A0G0JUL9|A0A0G0JUL9_9BACT;evalue=1e-076; PctID=78.26; score=291.
  
     0.555
SCM55172.1
Putative protein {ECO:0000313|EMBL:EFS30817,1}; tr|E5C6Q2|E5C6Q2_9BACE;evalue=0.0; PctID=64.94; score=682.
  
     0.440
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.