STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59679.1Putative protein {ECO:0000313|EMBL:KKR96100,1}; tr|A0A0G0XH47|A0A0G0XH47_9BACT;evalue=1e-141; PctID=56.83; score=509. (440 aa)    
Predicted Functional Partners:
yhaA3
Putative amidohydrolase YhaA; sp|O07598|YHAA_BACSU;evalue=9e-068; PctID=40.11; score=257.
     
 0.791
SCM59680.1
Putative transposase {ECO:0000313|EMBL:GAE66368,1}; tr|W4TD52|W4TD52_9FLAO;evalue=1e-136; PctID=61.89; score=493.
       0.529
SCM59677.1
Putative carbohydrate esterase At4g34215; sp|Q8L9J9|CAES_ARATH;evalue=1e-016; PctID=29.90; score=87.0.
       0.427
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.