STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCM59683.1Putative protein {ECO:0000313|EMBL:CEA16499,1}; tr|A0A098C0P2|A0A098C0P2_9PORP;evalue=2e-077; PctID=53.11; score=295. (318 aa)    
Predicted Functional Partners:
cip2-2
4-O-methyl-glucuronoyl methylesterase; Glucuronoyl esterase which may play a significant role in biomass degradation, as it is considered to disconnect hemicellulose from lignin through the hydrolysis of the ester bond between 4-O-methyl-D-glucuronic acid residues of glucuronoxylans and aromatic alcohols of lignin. Does not hydrolyze substrates of other carbohydrate esterases such as acetylxylan esterase, acetyl esterase and feruloyl esterase. Kinetic parameters: KM=0.5 mM for 4-nitrophenyl 2-O-(methyl-4-O-methyl-a-D-glucopyranosyluronate)-b-D- xylopyranoside; Vmax=5.5 umol/min/mg enzy [...]
 
     0.711
SCM59419.1
HI0933 family protein {ECO:0000313|EMBL:AEL27501,1}; tr|G0J475|G0J475_CYCMS;evalue=0.0; PctID=48.96; score=1040.
  
     0.658
SCM59676.1
Putative protein {ECO:0000313|EMBL:EIY68914,1}; tr|I9I7D6|I9I7D6_BACOV;evalue=1e-123; PctID=68.35; score=449.
 
     0.519
SCM55286.1
Putative protein {ECO:0000313|EMBL:CEA16997,1}; tr|A0A098C505|A0A098C505_9PORP;evalue=1e-070; PctID=60.00; score=273.
 
     0.518
SCM58094.1
Putative protein {ECO:0000313|EMBL:EES67198,1}; tr|C6IPB2|C6IPB2_9BACE,tr|Q8A1Q1|Q8A1Q1_BACTN; evalue=9e-135; PctID=63.14; score=486.
 
     0.502
nedA1
Sialidase; To release sialic acids for use as carbon and energy sources for this non-pathogenic bacterium while in pathogenic microorganisms, sialidases have been suggested to be pathogenic factors. alpha-(2->8)-glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. acid. ProRule:PRU00081}; sp|Q02834|NANH_MICVI;evalue=1e-019; PctID=32.04; score=98.2.
  
     0.470
SCM59682.1
Putative protein {ECO:0000313|EMBL:AHM63048,1}; tr|A0A0D3LMI2|A0A0D3LMI2_9BACT;evalue=2e-048; PctID=45.89; score=198.
       0.465
SCM59420.1
Putative protein {ECO:0000313|EMBL:EKN12730,1}; tr|K5ZN76|K5ZN76_9PORP;evalue=0.0; PctID=68.17; score=839.
  
    0.442
SCM58813.1
Putative protein {ECO:0000313|EMBL:EOS19560,1}; tr|S0GU68|S0GU68_9PORP;evalue=0.0; PctID=58.51; score=715.
  
    0.436
SCM55564.1
Putative protein {ECO:0000313|EMBL:KHM46289,1}; tr|A0A0B2JEW3|A0A0B2JEW3_9PORP;evalue=0.0; PctID=54.41; score=689.
  
     0.417
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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