STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
susC79TonB-dependent receptor SusC; Mediates transport of starch oligosaccharides from the surface of the outer membrane to the periplasm for subsequent degradation. pass membrane protein Sequence=AAA95938.1; Type=Frameshift; Positions=374, 380, 714, 724, 745; Evidence=; sp|Q8A1G1|SUSC_BACTN;evalue=8e-017; PctID=32.21; score=90.5. (1186 aa)    
Predicted Functional Partners:
SCM59697.1
SusD family protein {ECO:0000313|EMBL:EFK56214,1}; tr|D7VR13|D7VR13_9SPHI;evalue=1e-179; PctID=55.00; score=636.
 
     0.917
SCM55371.1
SusD family protein {ECO:0000313|EMBL:CCZ10242,1}; tr|R5PMQ0|R5PMQ0_9PORP;evalue=2e-179; PctID=52.10; score=636.
  
     0.775
SCM56245.1
Putative protein {ECO:0000313|EMBL:EIY54596,1}; tr|I9SF91|I9SF91_9BACE;evalue=0.0; PctID=65.12; score=880.
  
     0.774
SCM56463.1
Putative outer membrane protein {ECO:0000313|EMBL:CCX53063,1}; tr|R5BCM2|R5BCM2_9BACT,tr|R6YBE6|R6YBE6_9BACT; evalue=0.0; PctID=61.82; score=831.
  
     0.774
SCM57596.1
Putative protein {ECO:0000313|EMBL:EOS15738,1}; tr|S0GQC3|S0GQC3_9PORP;evalue=0.0; PctID=59.17; score=810.
  
     0.774
SCM58777.1
Outer membrane protein {ECO:0000313|EMBL:EFI14658,1}; tr|D7J0Z8|D7J0Z8_9BACE;evalue=0.0; PctID=58.10; score=642.
 
     0.774
SCM58781.1
Outer membrane protein {ECO:0000313|EMBL:EFI14656,1}; tr|D7J0Z6|D7J0Z6_9BACE;evalue=0.0; PctID=66.09; score=885.
  
     0.774
SCM59355.1
Putative protein {ECO:0000313|EMBL:EOA53690,1}; tr|U6RB23|U6RB23_9BACE;evalue=0.0; PctID=51.74; score=641.
  
     0.774
SCM56717.1
Putative protein {ECO:0000313|EMBL:EKN15371,1}; tr|K5ZV60|K5ZV60_9PORP,tr|S0GM76|S0GM76_9PORP; evalue=8e-171; PctID=51.82; score=607.
  
     0.773
SCM57248.1
RagB/SusD domain protein {ECO:0000313|EMBL:ACU04502,1}; tr|C6XYM0|C6XYM0_PEDHD;evalue=0.0; PctID=55.05; score=714.
  
     0.773
Your Current Organism:
Petrimonas mucosa
NCBI taxonomy Id: 1642646
Other names: CECT 8611, DSM 28695, P. mucosa, Petrimonas mucosa Hahnke et al. 2016, Petrimonas sp. ING2-E5A, strain ING2 E5A, strain ING2-E5A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.